STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS45857.1Methionine-gamma-lyase. (429 aa)    
Predicted Functional Partners:
KHS49062.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.942
KHS45558.1
Methionine synthase, vitamin-B12 independent.
  
 
 0.926
KHS46495.1
Cysteine synthase A.
 
 0.920
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.911
KHS43966.1
Pyridoxal-5'-phosphate-dependent enzyme subunit beta.
  
 0.903
KHS45109.1
Methionine synthase (B12-dependent).
  
 
 0.888
KHS42530.1
Homoserine dehydrogenase.
  
 
 0.860
KHS48830.1
O-acetylhomoserine aminocarboxypropyltransferase.
 
 
0.857
KHS46971.1
S-adenosylmethionine synthetase; Belongs to the AdoMet synthase family.
   
 0.851
KHS45108.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.845
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.