Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KHS45858.1AsnC family transcriptional regulator. (154 aa)    
Predicted Functional Partners:
KHS44542.1
AsnC family transcriptional regulator.
  
     0.771
KHS44494.1
AsnC family transcriptional regulator; Overlaps another CDS with the same product name.
  
     0.770
KHS45859.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.716
KHS44493.1
AsnC family transcriptional regulator; Overlaps another CDS with the same product name.
  
     0.643
KHS46809.1
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
    
  0.546
KHS45578.1
uroporphyrinogen-III C-methyltransferase.
  
 
  0.535
KHS44091.1
Siroheme synthase.
  
 
  0.535
KHS41694.1
uroporphyrin-III C-methyltransferase.
  
 
  0.535
KHS48249.1
Branched-chain alpha-keto acid dehydrogenase E1 component.
    
 0.433
KHS44067.1
Para-aminobenzoate synthase, component I.
     
 0.410
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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