Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS45883.1acyl-CoA dehydrogenase domain-containing protein. (381 aa)    
Predicted Functional Partners:
KHS42657.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.894
fadA
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.835
KHS43433.1
Electron transfer flavoprotein subunit alpha.
 
 0.824
KHS45884.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 0.792
KHS43434.1
Electron transfer flavoprotein subunit beta.
 
 
 0.759
KHS46611.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.758
KHS45881.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.755
KHS46021.1
enoyl-CoA hydratase.
  
  0.734
KHS48419.1
enoyl-CoA hydratase.
   
 0.707
KHS43976.1
enoyl-CoA hydratase.
   
 0.701
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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