STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS45615.1Metallo-beta-lactamase superfamily protein. (324 aa)    
Predicted Functional Partners:
KHS42056.1
MarR family transcriptional regulator.
  
     0.561
KHS45614.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
    0.558
KHS42355.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.554
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
       0.539
KHS44978.1
Rhodanese-like protein.
  
  0.531
KHS49239.1
Regulatory protein, MarR.
  
     0.481
KHS45571.1
MarR family transcriptional regulator.
  
     0.463
KHS49481.1
Mercuric transporter MerT.
  
 0.436
KHS48506.1
Hypothetical protein.
  
 0.436
KHS43376.1
Rhodanese-like protein.
  
 0.436
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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