STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galAAlpha-galactosidase. (632 aa)    
Predicted Functional Partners:
KHS44961.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.906
KHS44460.1
Putative esterase.
 
  
  0.900
KHS44970.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.857
KHS48399.1
Glycoside hydrolase, clan GH-D.
 
  
 0.840
KHS44480.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
  0.821
KHS48413.1
Alpha-glucosidase.
  
  
  0.815
KHS44356.1
Hypothetical protein.
 
     0.781
KHS44959.1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.776
KHS43879.1
alpha-L-arabinofuranosidase.
 
  
 0.771
KHS44467.1
alpha-L-fucosidase.
  
     0.761
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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