Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dgoAa2-dehydro-3-deoxyphosphogalactonate aldolase. (209 aa)    
Predicted Functional Partners:
dgoK
2-dehydro-3-deoxygalactonokinase.
 
 
 0.990
KHS44476.1
D-galactose 1-dehydrogenase.
 
  
 0.883
KHS44477.1
Putative sugar transporter.
       0.843
kdgK
2-dehydro-3-deoxygluconokinase.
 
 
 0.831
KHS44443.1
PfkB domain-containing protein.
 
 
 0.827
KHS45590.1
2-keto-3-deoxy-phosphogluconate aldolase.
  
  
 
0.811
KHS44478.1
Aldehyde dehydrogenase.
    
  0.754
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
 
 0.751
glk
Glucokinase; Belongs to the bacterial glucokinase family.
 
 
 0.750
KHS46809.1
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
     
  0.730
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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