STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS44476.1D-galactose 1-dehydrogenase. (308 aa)    
Predicted Functional Partners:
KHS44477.1
Putative sugar transporter.
 
    0.957
dgoK
2-dehydro-3-deoxygalactonokinase.
 
     0.929
KHS44480.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.907
KHS44478.1
Aldehyde dehydrogenase.
 
 
  0.896
dgoAa
2-dehydro-3-deoxyphosphogalactonate aldolase.
 
  
 0.886
KHS48789.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.752
KHS42074.1
UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.742
uxaC
Uronate isomerase.
    
 0.740
KHS44961.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
 0.714
KHS44970.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
    
 0.714
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.