Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS44493.1AsnC family transcriptional regulator; Overlaps another CDS with the same product name. (162 aa)    
Predicted Functional Partners:
KHS44494.1
AsnC family transcriptional regulator; Overlaps another CDS with the same product name.
 
    
0.859
KHS45858.1
AsnC family transcriptional regulator.
  
     0.643
KHS46715.1
AsnC family transcriptional regulator.
  
     0.622
KHS43239.1
AsnC family transcriptional regulator.
  
     0.612
KHS44523.1
AsnC family transcriptional regulator.
 
     0.555
KHS46809.1
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
    
  0.546
KHS45578.1
uroporphyrinogen-III C-methyltransferase.
  
 
  0.535
KHS44091.1
Siroheme synthase.
  
 
  0.535
KHS41694.1
uroporphyrin-III C-methyltransferase.
  
 
  0.535
KHS44495.1
Heavy metal efflux system protein; Overlaps another CDS with the same product name.
       0.462
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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