STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS44493.1AsnC family transcriptional regulator; Overlaps another CDS with the same product name. (162 aa)    
Predicted Functional Partners:
KHS44494.1
AsnC family transcriptional regulator; Overlaps another CDS with the same product name.
 
    
0.861
KHS46809.1
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
    
  0.664
KHS45858.1
AsnC family transcriptional regulator.
  
     0.643
KHS46715.1
AsnC family transcriptional regulator.
  
     0.622
KHS43239.1
AsnC family transcriptional regulator.
  
     0.612
KHS44067.1
Para-aminobenzoate synthase, component I.
     
 0.608
KHS45578.1
uroporphyrinogen-III C-methyltransferase.
  
 
 0.589
KHS44091.1
Siroheme synthase.
  
 
 0.589
KHS41694.1
uroporphyrin-III C-methyltransferase.
  
 
 0.589
KHS44523.1
AsnC family transcriptional regulator.
 
     0.555
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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