STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS44496.1Heavy metal efflux system protein; Overlaps another CDS with the same product name; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1035 aa)    
Predicted Functional Partners:
KHS44497.1
Heavy metal efflux system protein; Overlaps another CDS with the same product name; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.968
cusB
Copper efflux system membrane protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.953
czcB_1
Metal ion efflux membrane fusion protein family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.883
czcB_2
Metal ion efflux membrane fusion protein family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.883
KHS44495.1
Heavy metal efflux system protein; Overlaps another CDS with the same product name.
 
 
  0.875
czcC_2
Cation resistance protein CzcC.
 
 
  0.767
czcC_1
Cation resistance protein CzcC.
 
 
  0.755
KHS42511.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.697
KHS44498.1
Hypothetical protein.
       0.588
czcC_3
Cation resistance protein CzcC.
 
 
  0.577
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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