Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS44297.1Cobyrinic acid a,c-diamide synthase. (241 aa)    
Predicted Functional Partners:
KHS44295.1
Sporulation domain-containing protein.
 
     0.846
KHS44296.1
Hypothetical protein.
       0.800
KHS46894.1
Bacteriophage N4 adsorption protein B.
 
 
 0.656
KHS42029.1
parB-like partition protein; Belongs to the ParB family.
  
   0.590
KHS43470.1
Hypothetical protein.
  
     0.588
KHS49345.1
parB-like partition protein.
  
   0.585
KHS49567.1
parB-like partition protein.
  
   0.585
KHS42605.1
parB-like partition protein; Belongs to the ParB family.
  
   0.566
KHS45083.1
parB-like partition protein; Belongs to the ParB family.
 
 
 0.558
KHS43759.1
parB-like partition protein; Belongs to the ParB family.
 
 
 0.557
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.