Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
msrA-2Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (178 aa)    
Predicted Functional Partners:
KHS47713.1
protein-methionine-S-oxide reductase.
 
 0.987
msrB
protein-methionine-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
 
 0.987
KHS44389.1
Cytochrome c biogenesis protein, transmembrane region.
   
 
 0.773
KHS49085.1
Glutaredoxin.
   
 
 0.707
KHS48454.1
Glutaredoxin GrxC; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
   
 
 0.707
KHS44133.1
Putative methyltransferase.
       0.552
KHS46824.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
  
 
 0.539
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.537
KHS49438.1
Conjugal transfer pilus assembly protein TraF.
   
 0.516
KHS49660.1
Conjugal transfer pilus assembly protein TraF.
   
 0.516
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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