STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS44135.12-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase. (162 aa)    
Predicted Functional Partners:
KHS48354.1
Dihydropteroate synthase.
 
 
 0.999
KHS48132.1
Dihydroneopterin aldolase-like protein.
  
 
 0.997
KHS44067.1
Para-aminobenzoate synthase, component I.
 
 
 0.925
folE
GTP cyclohydrolase.
 
  
 0.894
folE-2
GTP cyclohydrolase.
 
  
 0.893
folE-3
GTP cyclohydrolase.
 
  
 0.892
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.857
ribB-2
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.857
KHS48228.1
Polynucleotide adenylyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
    0.828
KHS46598.1
FolC bifunctional protein; Belongs to the folylpolyglutamate synthase family.
 
 
 0.823
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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