Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS44136.1Taurine dioxygenase. (317 aa)    
Predicted Functional Partners:
KHS43783.1
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein.
 
 
 0.770
KHS49391.1
Putative flavodoxin reductase.
   
 
  0.701
KHS49613.1
Putative flavodoxin reductase.
   
 
  0.701
KHS45183.1
Putative flavodoxin reductase.
   
 
  0.701
KHS45873.1
ABC transporter periplasmic substrate-binding protein.
  
 
 0.685
sucA
2-oxoglutarate dehydrogenase E1.
   
   0.679
KHS45582.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.662
KHS44137.1
Major facilitator transporter.
  
    0.661
KHS45872.1
Binding-protein-dependent transport systems inner membrane component.
  
 
 0.654
KHS44138.1
TonB-dependent receptor.
       0.653
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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