STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS44136.1Taurine dioxygenase. (317 aa)    
Predicted Functional Partners:
KHS45582.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.755
KHS45872.1
Binding-protein-dependent transport systems inner membrane component.
  
 
 0.714
KHS43783.1
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein.
 
 0.708
KHS45873.1
ABC transporter periplasmic substrate-binding protein.
  
 
  0.671
KHS41688.1
Sulfonate/nitrate/taurine transport system permease.
  
 
 0.667
KHS44137.1
Major facilitator transporter.
  
    0.664
KHS44138.1
TonB-dependent receptor.
       0.653
KHS44139.1
Hypothetical protein.
       0.653
KHS44551.1
Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.585
KHS41686.1
Nitrate transporter component, nrtA.
  
 
  0.581
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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