Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS44153.1Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)    
Predicted Functional Partners:
KHS48700.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.772
KHS48684.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.764
KHS45062.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.759
KHS44152.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.757
KHS48093.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.752
KHS46074.1
Short-chain dehydrogenase/reductase SDR; Overlaps another CDS with the same product name.
  
  
  0.746
KHS44974.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.743
KHS44151.1
Hypothetical protein.
       0.718
KHS45994.1
7-Alpha-hydroxysteroid dehydrogenase.
  
  
  0.706
KHS45080.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.636
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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