STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS43988.1FAD dependent oxidoreductase. (371 aa)    
Predicted Functional Partners:
thiG
Bifunctional sulfur carrier protein/thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 
 0.942
KHS42355.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.939
KHS43441.1
Glutamate synthase (NADH) large subunit.
  
 
 0.896
KHS43987.1
Lysophospholipase L2.
       0.855
KHS41693.1
Assimilatory nitrate reductase (NADH) subunit alpha apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.769
KHS43983.1
Pilus assembly protein CpaD.
 
     0.731
KHS43986.1
Peptidase A24A, prepilin type IV.
       0.716
gcvT
Glycine cleavage system aminomethyltransferase T.
  
 0.709
KHS45553.1
Glycine cleavage T protein (aminomethyl transferase); Belongs to the GcvT family.
 
 0.681
KHS48705.1
Glycine cleavage system protein T; Belongs to the GcvT family.
  
 0.637
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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