Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KHS44048.1Major facilitator transporter. (393 aa)    
Predicted Functional Partners:
KHS44046.1
Glucan endo-1,3-beta-D-glucosidase.
 
     0.846
KHS44047.1
LacI family transcription regulator.
 
     0.817
KHS44042.1
Tryptophan halogenase.
       0.814
KHS44043.1
SapC.
       0.792
KHS44045.1
Tryptophan halogenase.
       0.792
KHS44044.1
PASs1-related protein.
       0.791
KHS44049.1
Beta-glucosidase.
 
     0.669
KHS44041.1
TonB-dependent receptor.
       0.538
KHS48477.1
Hemolysin activation/secretion protein-like protein.
  
     0.535
KHS45532.1
Hemolysin activation/secretion protein-like protein.
  
     0.496
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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