Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS43849.1Putative oxidoreductase. (379 aa)    
Predicted Functional Partners:
KHS47020.1
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; Belongs to the UPF0255 family.
 
  
  0.805
KHS43838.1
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein.
 
  
  0.794
KHS43842.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
  0.787
KHS41680.1
Cupin.
 
 
  0.784
KHS48490.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
  0.783
KHS43847.1
NAD-dependent epimerase/dehydratase.
 
   0.779
KHS43846.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.774
KHS43840.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
  0.759
KHS47021.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
  0.757
KHS47018.1
Cyclase.
 
  
  0.753
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (26%) [HD]