Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS43877.1Rieske (2Fe-2S) domain-containing protein. (394 aa)    
Predicted Functional Partners:
KHS46713.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
  
  0.789
KHS42358.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
  
  0.782
KHS42360.1
3-phenylpropionate dioxygenase subunit beta.
  
  0.772
KHS43774.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
  
  0.762
KHS43813.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
 
  0.756
KHS43816.1
Small terminal subunit of phenylpropionate dioxygenase.
 
  0.678
KHS42351.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
 
  0.631
KHS43878.1
Rieske (2Fe-2S) domain-containing protein.
 
    
0.620
KHS43809.1
Aromatic-ring-hydroxylating dioxygenase subunit beta.
 
  0.610
KHS42005.1
Rieske (2Fe-2S) domain-containing protein.
 
     0.598
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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