STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS42652.1Alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)    
Predicted Functional Partners:
KHS48638.1
Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.990
KHS42962.1
Carboxylesterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.990
KHS42295.1
Iron-containing alcohol dehydrogenase.
    
 0.928
KHS44152.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.750
KHS48202.1
Alcohol dehydrogenase.
  
  
 
0.726
KHS46514.1
Aldehyde dehydrogenase.
 
 
  0.708
KHS44512.1
Aldehyde dehydrogenase.
   
  0.708
adh_1
Zn-dependent alcohol dehydrogenase.
    
0.652
adh_2
Zn-dependent alcohol dehydrogenase.
    
0.652
adh_3
Zn-dependent alcohol dehydrogenase.
    
0.652
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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