STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS42076.1Sugar transferase. (436 aa)    
Predicted Functional Partners:
KHS42079.1
Non-specific protein-tyrosine kinase.
 
 
 0.982
KHS44080.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.965
KHS42078.1
Putative polysaccharide export protein.
 
 
 0.835
KHS42077.1
O-antigen polymerase family protein.
 
  
 0.777
KHS49215.1
Exopolysaccharide biosynthesis protein.
 
 
 0.730
KHS41756.1
Protein-tyrosine kinase.
 
 
 0.719
KHS41795.1
Glycosyltransferase.
 
 
 0.680
KHS49217.1
Polysaccharide export protein.
 
 
 0.677
KHS49006.1
Sugar transferase.
 
 
0.667
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.661
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (38%) [HD]