Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KHS41754.1 | KHS41755.1 | NJ75_04474 | NJ75_04475 | Methanolan biosynthesis EpsI. | Transmembrane protein EpsH. | 0.963 |
KHS41754.1 | KHS41756.1 | NJ75_04474 | NJ75_04476 | Methanolan biosynthesis EpsI. | Protein-tyrosine kinase. | 0.865 |
KHS41754.1 | KHS41761.1 | NJ75_04474 | NJ75_04481 | Methanolan biosynthesis EpsI. | Hypothetical protein. | 0.875 |
KHS41754.1 | gelD | NJ75_04474 | NJ75_04478 | Methanolan biosynthesis EpsI. | Periplasmic protein GelD involved in polysaccharide export. | 0.856 |
KHS41754.1 | gelF | NJ75_04474 | NJ75_04479 | Methanolan biosynthesis EpsI. | Gellan polysaccharide biosynthesis protein GelF. | 0.761 |
KHS41754.1 | gumC | NJ75_04474 | NJ75_04477 | Methanolan biosynthesis EpsI. | Putative protein involved in exopolysaccharide biosynthesis. | 0.959 |
KHS41755.1 | KHS41754.1 | NJ75_04475 | NJ75_04474 | Transmembrane protein EpsH. | Methanolan biosynthesis EpsI. | 0.963 |
KHS41755.1 | KHS41756.1 | NJ75_04475 | NJ75_04476 | Transmembrane protein EpsH. | Protein-tyrosine kinase. | 0.883 |
KHS41755.1 | KHS41761.1 | NJ75_04475 | NJ75_04481 | Transmembrane protein EpsH. | Hypothetical protein. | 0.875 |
KHS41755.1 | KHS49213.1 | NJ75_04475 | NJ75_00650 | Transmembrane protein EpsH. | ATPase. | 0.758 |
KHS41755.1 | KHS49217.1 | NJ75_04475 | NJ75_00654 | Transmembrane protein EpsH. | Polysaccharide export protein. | 0.769 |
KHS41755.1 | atpE | NJ75_04475 | NJ75_02822 | Transmembrane protein EpsH. | ATP synthase subunit c, sodium ion specific; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.993 |
KHS41755.1 | atpE-2 | NJ75_04475 | NJ75_02171 | Transmembrane protein EpsH. | H+-transporting two-sector ATPase, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.993 |
KHS41755.1 | gelD | NJ75_04475 | NJ75_04478 | Transmembrane protein EpsH. | Periplasmic protein GelD involved in polysaccharide export. | 0.927 |
KHS41755.1 | gelF | NJ75_04475 | NJ75_04479 | Transmembrane protein EpsH. | Gellan polysaccharide biosynthesis protein GelF. | 0.761 |
KHS41755.1 | gumC | NJ75_04475 | NJ75_04477 | Transmembrane protein EpsH. | Putative protein involved in exopolysaccharide biosynthesis. | 0.961 |
KHS41756.1 | KHS41754.1 | NJ75_04476 | NJ75_04474 | Protein-tyrosine kinase. | Methanolan biosynthesis EpsI. | 0.865 |
KHS41756.1 | KHS41755.1 | NJ75_04476 | NJ75_04475 | Protein-tyrosine kinase. | Transmembrane protein EpsH. | 0.883 |
KHS41756.1 | KHS41761.1 | NJ75_04476 | NJ75_04481 | Protein-tyrosine kinase. | Hypothetical protein. | 0.457 |
KHS41756.1 | KHS49217.1 | NJ75_04476 | NJ75_00654 | Protein-tyrosine kinase. | Polysaccharide export protein. | 0.687 |
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