Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KHS41769.1Hypothetical protein. (526 aa)    
Predicted Functional Partners:
KHS44080.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.884
KHS49006.1
Sugar transferase.
  
 
 0.835
KHS41768.1
Hexapeptide repeat-containing transferase.
       0.771
KHS41767.1
Hexapeptide repeat-containing transferase.
       0.556
KHS42079.1
Non-specific protein-tyrosine kinase.
  
 
 0.512
KHS41778.1
Hypothetical protein.
  
  
 0.433
murJ
Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
    
 0.422
KHS42076.1
Sugar transferase.
  
 
 0.408
KHS41783.1
Putative sugar transferase.
  
 
 0.408
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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