Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS41776.1Hypothetical protein. (366 aa)    
Predicted Functional Partners:
KHS41780.1
Glycosyl transferase.
 
 
 
 0.870
KHS41777.1
Hypothetical protein.
 
     0.824
KHS41778.1
Hypothetical protein.
       0.773
KHS41779.1
Group 1 glycosyl transferase.
       0.773
KHS41654.1
Phage protein.
 
 
   0.728
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
  0.712
KHS41653.1
Hypothetical protein.
   
   0.693
KHS41994.1
Bifunctional NMN adenylyltransferase/Nudix hydrolase.
     
  0.681
KHS43757.1
Plasmid encoded RepA protein.
  
     0.661
murG_2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
  
   
 0.588
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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