Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS41680.1Cupin. (175 aa)    
Predicted Functional Partners:
KHS41679.1
Fumarylacetoacetate (FAA) hydrolase.
 
    0.831
KHS43847.1
NAD-dependent epimerase/dehydratase.
 
  
  0.816
KHS47022.1
FAD-binding monooxygenase.
 
  0.800
KHS43849.1
Putative oxidoreductase.
 
 
  0.784
KHS47020.1
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; Belongs to the UPF0255 family.
 
    0.773
KHS43841.1
FAD-binding monooxygenase.
 
 
  0.762
KHS43838.1
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein.
 
    0.743
KHS43903.1
Feruloyl esterase.
  
     0.720
KHS47021.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.635
KHS48490.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.612
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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