STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS41693.1Assimilatory nitrate reductase (NADH) subunit alpha apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (836 aa)    
Predicted Functional Partners:
KHS41691.1
Assimilatory nitrite reductase (NAD(P)H) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.998
KHS41692.1
Nitrite reductase (NAD(P)H) large subunit, NirD.
 
 
 0.993
KHS47718.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
 0.980
KHS47750.1
Ferredoxin-like protein.
  
 0.973
KHS46111.1
Formate dehydrogenase subunit alpha.
 
0.973
KHS41687.1
Histidine kinase.
 
 
 0.971
KHS41688.1
Sulfonate/nitrate/taurine transport system permease.
 
  
 0.971
KHS41686.1
Nitrate transporter component, nrtA.
 
 
 0.967
KHS43441.1
Glutamate synthase (NADH) large subunit.
  
 
 0.965
KHS41689.1
ABC transporter ATPase.
 
  
 0.958
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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