Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS41667.1Family 2 glycosyl transferase. (296 aa)    
Predicted Functional Partners:
KHS41665.1
Hypothetical protein.
  
    0.780
KHS41666.1
Hypothetical protein.
  
    0.773
KHS41668.1
Hypothetical protein.
       0.714
KHS41795.1
Glycosyltransferase.
 
  
  0.690
KHS49006.1
Sugar transferase.
 
  
 0.689
gumH
Xanthan biosynthesis glucuronosyltransferase GumH.
  
 
  0.564
KHS42076.1
Sugar transferase.
 
  
 0.508
KHS41783.1
Putative sugar transferase.
 
  
 0.500
KHS49080.1
TPR repeat-containing protein.
   
 0.446
KHS41670.1
Putative glycosyltransferase.
  
 
  0.435
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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