Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS41646.1Putative phage-like protein. (183 aa)    
Predicted Functional Partners:
KHS41649.1
Phage major tail protein, TP901-1.
 
   0.985
KHS41653.1
Hypothetical protein.
 
 
   0.980
KHS41652.1
Hypothetical protein.
 
 
   0.979
KHS41654.1
Phage protein.
 
 
   0.974
KHS41642.1
Phage portal protein, HK97.
 
 
 0.965
KHS41645.1
Phage major capsid protein, HK97.
 
 
 0.959
KHS41656.1
Hypothetical protein.
 
 
 
 0.955
KHS41657.1
Hypothetical protein.
 
 
   0.928
KHS41643.1
Hypothetical protein.
 
     0.887
KHS41648.1
Hypothetical protein.
       0.843
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.