Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS41581.1Multidrug resistance efflux pump. (375 aa)    
Predicted Functional Partners:
KHS41580.1
EmrB/QacA family drug resistance transporter; Belongs to the major facilitator superfamily.
 
 
 0.966
KHS41579.1
Outer membrane protein.
 
  0.864
KHS46769.1
EmrB/QacA family drug resistance transporter; Belongs to the major facilitator superfamily.
 
 
 0.860
KHS46098.1
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
 
 0.859
KHS43771.1
Putative MFS permease; Belongs to the major facilitator superfamily.
 
 
 0.859
hlyB
Hemolysin secretion protein HlyB.
  
 0.806
KHS42287.1
Major facilitator transporter.
 
 
 0.752
KHS43769.1
RND efflux system outer membrane lipoprotein.
 
  0.737
KHS46768.1
RND efflux system outer membrane lipoprotein NodT.
 
  0.735
KHS49368.1
RND efflux system outer membrane lipoprotein.
 
  0.685
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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