STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP63614.1Protein of unknown function. (2410 aa)    
Predicted Functional Partners:
SEP63693.1
Hypothetical protein.
 
     0.947
SEP63754.1
ATPase family associated with various cellular activities (AAA).
 
   
 0.933
SEP63828.1
Phage tail protein domain-containing protein.
 
     0.933
SEP63862.1
Putative baseplate assembly protein.
 
 
   0.915
SEP63895.1
Hypothetical protein.
 
 
   0.915
SEP63990.1
Phage late control gene D protein (GPD).
 
 
   0.912
SEP64051.1
Hypothetical protein.
 
 
   0.899
SEP64080.1
Conserved hypothetical phage tail region protein.
 
 
   0.898
SEP64113.1
Hypothetical protein.
 
 
   0.898
SEP63957.1
Hypothetical protein.
 
  
 0.896
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.