Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP64326.1 | SEP99809.1 | SAMN04488038_10157 | SAMN04488038_10332 | Uncharacterized conserved protein. | Penicillin amidase. | 0.517 |
SEP64326.1 | SEQ03356.1 | SAMN04488038_10157 | SAMN04488038_103140 | Uncharacterized conserved protein. | Calcineurin-like phosphoesterase. | 0.662 |
SEP64326.1 | SEQ16319.1 | SAMN04488038_10157 | SAMN04488038_104147 | Uncharacterized conserved protein. | Hypothetical protein. | 0.514 |
SEP64326.1 | SEQ33484.1 | SAMN04488038_10157 | SAMN04488038_105267 | Uncharacterized conserved protein. | Glycerophosphoryl diester phosphodiesterase. | 0.505 |
SEP64326.1 | SEQ52330.1 | SAMN04488038_10157 | SAMN04488038_107164 | Uncharacterized conserved protein. | Soluble methane monooxygenase hydroxylase component alpha subunit apoprotein. | 0.522 |
SEP64326.1 | SER16809.1 | SAMN04488038_10157 | SAMN04488038_1189 | Uncharacterized conserved protein. | Glycerophosphoryl diester phosphodiesterase. | 0.505 |
SEP64326.1 | guaB | SAMN04488038_10157 | SAMN04488038_102303 | Uncharacterized conserved protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.613 |
SEP64326.1 | pyrE | SAMN04488038_10157 | SAMN04488038_107114 | Uncharacterized conserved protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.598 |
SEP64326.1 | pyrF | SAMN04488038_10157 | SAMN04488038_105189 | Uncharacterized conserved protein. | Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.603 |
SEP64326.1 | surE | SAMN04488038_10157 | SAMN04488038_101411 | Uncharacterized conserved protein. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.604 |
SEP99809.1 | SEP64326.1 | SAMN04488038_10332 | SAMN04488038_10157 | Penicillin amidase. | Uncharacterized conserved protein. | 0.517 |
SEQ03356.1 | SEP64326.1 | SAMN04488038_103140 | SAMN04488038_10157 | Calcineurin-like phosphoesterase. | Uncharacterized conserved protein. | 0.662 |
SEQ16319.1 | SEP64326.1 | SAMN04488038_104147 | SAMN04488038_10157 | Hypothetical protein. | Uncharacterized conserved protein. | 0.514 |
SEQ33484.1 | SEP64326.1 | SAMN04488038_105267 | SAMN04488038_10157 | Glycerophosphoryl diester phosphodiesterase. | Uncharacterized conserved protein. | 0.505 |
SEQ33484.1 | SER16809.1 | SAMN04488038_105267 | SAMN04488038_1189 | Glycerophosphoryl diester phosphodiesterase. | Glycerophosphoryl diester phosphodiesterase. | 0.656 |
SEQ52330.1 | SEP64326.1 | SAMN04488038_107164 | SAMN04488038_10157 | Soluble methane monooxygenase hydroxylase component alpha subunit apoprotein. | Uncharacterized conserved protein. | 0.522 |
SER16809.1 | SEP64326.1 | SAMN04488038_1189 | SAMN04488038_10157 | Glycerophosphoryl diester phosphodiesterase. | Uncharacterized conserved protein. | 0.505 |
SER16809.1 | SEQ33484.1 | SAMN04488038_1189 | SAMN04488038_105267 | Glycerophosphoryl diester phosphodiesterase. | Glycerophosphoryl diester phosphodiesterase. | 0.656 |
guaB | SEP64326.1 | SAMN04488038_102303 | SAMN04488038_10157 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Uncharacterized conserved protein. | 0.613 |
guaB | pyrE | SAMN04488038_102303 | SAMN04488038_107114 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.508 |
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