STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP93096.1Tetratricopeptide repeat-containing protein. (363 aa)    
Predicted Functional Partners:
SEQ20042.1
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family.
 0.915
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 0.914
SEQ81548.1
PAS domain S-box-containing protein.
 
 0.890
SEQ90082.1
Quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein.
 
 
 0.888
SEQ06454.1
Cellobiose phosphorylase.
  
 
 0.871
SER14715.1
Signal transduction histidine kinase.
  
 0.868
SEQ91085.1
Diguanylate cyclase, GGDEF domain.
    
 0.865
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.863
SEQ85340.1
Signal transduction histidine kinase.
   
 0.860
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.855
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.