STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ05463.1Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily. (1449 aa)    
Predicted Functional Partners:
SEQ95763.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
0.987
SEQ05434.1
Acyl transferase domain-containing protein.
 
0.973
SEQ65674.1
[acyl-carrier-protein] S-malonyltransferase.
 0.963
SEP65943.1
NADPH2:quinone reductase.
  
 0.945
SER18674.1
NADPH2:quinone reductase.
  
 0.944
SEQ95788.1
Acyl transferase domain-containing protein; Belongs to the P-Pant transferase superfamily.
 
 
0.934
SEQ05528.1
Glycosyltransferase, MGT family.
 
  
 0.923
SEQ56694.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
 
0.888
SEQ05590.1
Hypothetical protein.
  
 0.858
SEQ05733.1
ATP-dependent DNA helicase RecG.
  
 0.858
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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