STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ01058.1Catecholate siderophore receptor. (778 aa)    
Predicted Functional Partners:
SEQ01099.1
PKHD-type hydroxylase.
  
 0.987
SEQ01242.1
Uncharacterized iron-regulated membrane protein.
 
  
 0.881
SEQ01166.1
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1).
 
  
 0.791
SEQ01130.1
Protein TonB.
 
   
 0.775
SEQ01202.1
Biopolymer transport protein ExbD.
  
  
 0.737
SEQ43061.1
Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.719
SEQ43524.1
Iron complex outermembrane recepter protein.
  
  
 0.690
SEP65297.1
TonB-dependent Receptor Plug Domain.
  
  
 0.647
SER08644.1
Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.640
SEQ58967.1
Iron complex outermembrane recepter protein.
 
  
 0.619
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.