STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ30542.1Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. (510 aa)    
Predicted Functional Partners:
SEQ76986.1
Acetyl esterase/lipase.
 
  0.847
SEP73529.1
Acetyl esterase.
 
  0.774
SEQ82974.1
Acetyl esterase/lipase.
 
  0.746
SEQ84412.1
Acetyl esterase/lipase.
 
 
  0.678
SEQ38860.1
2,4-dienoyl-CoA reductase.
     
 0.663
SEQ53884.1
Saccharopine dehydrogenase (NAD+, L-glutamate forming).
  
     0.608
SEQ30581.1
AraC-type DNA-binding protein.
 
     0.595
SEQ99527.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.576
atpA
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.563
SEQ07813.1
EF hand.
    
   0.537
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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