Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEP66525.1 | SEQ05434.1 | SAMN04488038_101123 | SAMN04488038_103205 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Acyl transferase domain-containing protein. | 0.841 |
| SEP66525.1 | SEQ42225.1 | SAMN04488038_101123 | SAMN04488038_106126 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 3-methylcrotonyl-CoA carboxylase beta subunit. | 0.901 |
| SEP66525.1 | SEQ42267.1 | SAMN04488038_101123 | SAMN04488038_106127 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 3-methylcrotonyl-CoA carboxylase alpha subunit. | 0.759 |
| SEP66525.1 | SEQ53366.1 | SAMN04488038_101123 | SAMN04488038_107193 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Urea carboxylase precursor. | 0.878 |
| SEP66525.1 | SEQ56694.1 | SAMN04488038_101123 | SAMN04488038_1081 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Polyketide-type polyunsaturated fatty acid synthase PfaA. | 0.841 |
| SEP66525.1 | SEQ81870.1 | SAMN04488038_101123 | SAMN04488038_11120 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein. | 0.754 |
| SEP66525.1 | SEQ81916.1 | SAMN04488038_101123 | SAMN04488038_11121 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Biotin-requiring enzyme. | 0.796 |
| SEP66525.1 | SER15869.1 | SAMN04488038_101123 | SAMN04488038_11791 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.742 |
| SEP66525.1 | birA | SAMN04488038_101123 | SAMN04488038_11213 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.966 |
| SEQ05434.1 | SEP66525.1 | SAMN04488038_103205 | SAMN04488038_101123 | Acyl transferase domain-containing protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.841 |
| SEQ05434.1 | SEQ42199.1 | SAMN04488038_103205 | SAMN04488038_106125 | Acyl transferase domain-containing protein. | isovaleryl-CoA dehydrogenase. | 0.799 |
| SEQ05434.1 | SEQ42225.1 | SAMN04488038_103205 | SAMN04488038_106126 | Acyl transferase domain-containing protein. | 3-methylcrotonyl-CoA carboxylase beta subunit. | 0.868 |
| SEQ05434.1 | SEQ42267.1 | SAMN04488038_103205 | SAMN04488038_106127 | Acyl transferase domain-containing protein. | 3-methylcrotonyl-CoA carboxylase alpha subunit. | 0.859 |
| SEQ05434.1 | SEQ53366.1 | SAMN04488038_103205 | SAMN04488038_107193 | Acyl transferase domain-containing protein. | Urea carboxylase precursor. | 0.908 |
| SEQ05434.1 | SEQ56694.1 | SAMN04488038_103205 | SAMN04488038_1081 | Acyl transferase domain-containing protein. | Polyketide-type polyunsaturated fatty acid synthase PfaA. | 0.999 |
| SEQ05434.1 | SEQ81870.1 | SAMN04488038_103205 | SAMN04488038_11120 | Acyl transferase domain-containing protein. | acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein. | 0.859 |
| SEQ05434.1 | SEQ81916.1 | SAMN04488038_103205 | SAMN04488038_11121 | Acyl transferase domain-containing protein. | Biotin-requiring enzyme. | 0.859 |
| SEQ05434.1 | SER15869.1 | SAMN04488038_103205 | SAMN04488038_11791 | Acyl transferase domain-containing protein. | acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.954 |
| SEQ05434.1 | birA | SAMN04488038_103205 | SAMN04488038_11213 | Acyl transferase domain-containing protein. | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.559 |
| SEQ42199.1 | SEQ05434.1 | SAMN04488038_106125 | SAMN04488038_103205 | isovaleryl-CoA dehydrogenase. | Acyl transferase domain-containing protein. | 0.799 |
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