STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ48813.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (346 aa)    
Predicted Functional Partners:
SER07764.1
Acyl-CoA dehydrogenase.
  0.982
SEQ47422.1
Hypothetical protein.
 
 
  0.879
SEP87147.1
Acyl-CoA dehydrogenase.
 
 
  0.825
SEQ81579.1
isovaleryl-CoA dehydrogenase.
 
 
  0.824
SEP67086.1
Acyl-CoA dehydrogenase.
 
 
  0.816
SEQ91916.1
citronellyl-CoA dehydrogenase.
 
 
  0.782
SER18674.1
NADPH2:quinone reductase.
 
  0.706
SEQ00048.1
acyl-CoA dehydrogenase.
 
 
  0.696
SEP87116.1
Acyl-CoA dehydrogenase.
 
 
  0.686
SEQ47838.1
acyl-CoA dehydrogenase.
 
 
  0.563
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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