STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ86093.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (287 aa)    
Predicted Functional Partners:
SEQ05434.1
Acyl transferase domain-containing protein.
   
 0.816
SEQ56694.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
   
 0.816
SEQ95763.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 0.816
SER22367.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.780
SEQ30794.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.772
SEQ30675.1
SnoaL-like domain-containing protein.
 
     0.764
SEQ25846.1
Steroid delta-isomerase.
  
     0.759
SEQ86246.1
Glutaconate CoA-transferase subunit B.
  
  
  0.759
SEQ30712.1
Protein of unknown function.
  
     0.738
SEQ25865.1
DNA-binding transcriptional regulator, CsgD family.
  
     0.736
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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