STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ83812.1Isoquinoline 1-oxidoreductase, alpha subunit. (153 aa)    
Predicted Functional Partners:
SEP70598.1
Carbon-monoxide dehydrogenase large subunit.
 0.999
SEP70672.1
Carbon-monoxide dehydrogenase medium subunit.
 0.999
SEQ83778.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.999
SEQ73609.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
  0.980
SEQ83753.1
Xanthine and CO dehydrogenase maturation factor, XdhC/CoxF family.
 
 
 0.955
SEQ83727.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.938
SEQ73584.1
Molybdenum cofactor sulfurylase.
 
 
 0.805
SEQ00225.1
Salicylate hydroxylase.
  
 
 0.789
SEQ53366.1
Urea carboxylase precursor.
    
 0.740
SER11660.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.732
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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