STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ90328.1mxaL protein. (334 aa)    
Predicted Functional Partners:
SEQ90215.1
mxaA protein.
 
  
 0.981
SEQ90253.1
mxaC protein.
 
  
 0.981
SEQ90185.1
Hypothetical protein.
 
  
 0.960
SEQ90156.1
MoxR-like ATPase.
 
 
 0.926
SEQ90082.1
Quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein.
 
  
  0.843
SEQ90114.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
  
  0.841
SEQ90044.1
PQQ-dependent dehydrogenase, methanol/ethanol family.
 
  
  0.819
SEQ90290.1
Hypothetical protein.
       0.773
SEQ19675.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.764
SEQ19704.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
  
  0.757
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.