STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER11251.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (409 aa)    
Predicted Functional Partners:
SER11223.1
Two component transcriptional regulator, LuxR family.
 
 0.978
SEP71060.1
Two component transcriptional regulator, LuxR family.
 
 0.909
SEQ05182.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
 0.909
SEQ51617.1
Two-component system, NarL family, invasion response regulator UvrY.
 
 0.909
SEQ19619.1
Two component transcriptional regulator, LuxR family.
 
 0.908
SEQ62343.1
Two component transcriptional regulator, LuxR family.
 
 0.907
SEQ74644.1
Two-component system, NarL family, invasion response regulator UvrY.
 
 0.907
SER11559.1
Two component transcriptional regulator, LuxR family.
 
 0.898
SER14690.1
Regulatory protein, luxR family.
 
 0.877
SEQ81548.1
PAS domain S-box-containing protein.
   
 0.860
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.