STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER13790.1Glyoxylase, beta-lactamase superfamily II. (216 aa)    
Predicted Functional Partners:
SER07585.1
Lactoylglutathione lyase.
  
  
 0.711
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
  
  
0.644
SEQ47952.1
Rubredoxin.
   
 0.610
SEQ24835.1
Rhodanese-related sulfurtransferase.
  
 0.609
SEP67157.1
Sulfide dehydrogenase [flavocytochrome c] flavoprotein chain.
   
 0.608
SER13820.1
SEC-C motif-containing protein.
       0.590
SEQ70120.1
Glyoxylase, beta-lactamase superfamily II.
 
0.580
SEQ74165.1
Glyoxylase, beta-lactamase superfamily II.
  
  
  0.565
SER13772.1
Protein of unknown function.
       0.510
SEQ05434.1
Acyl transferase domain-containing protein.
   
 0.486
Your Current Organism:
Solimonas aquatica
NCBI taxonomy Id: 489703
Other names: BCRC 17835, DSM 25927, LMG 24500, LMG:24500, S. aquatica, Solimonas aquatica Sheu et al. 2011, Solimonas sp. NAA16, strain NAA16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.