STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001696685_01179Unannotated protein. (159 aa)    
Predicted Functional Partners:
GCA_001696685_01178
Unannotated protein.
    0.947
GCA_001696685_01180
Unannotated protein.
  
  
 0.880
GCA_001696685_00443
Unannotated protein.
 
   
 0.803
GCA_001696685_00168
Unannotated protein.
     
 0.698
GCA_001696685_01150
Unannotated protein.
      
 0.601
GCA_001696685_01172
Unannotated protein.
     
 0.533
GCA_001696685_01447
Unannotated protein.
   
   0.507
GCA_001696685_01177
Unannotated protein.
  
    0.505
GCA_001696685_01407
Unannotated protein.
      
 0.504
GCA_001696685_01173
Unannotated protein.
  
  
 0.487
Your Current Organism:
Nosocomiicoccus ampullae
NCBI taxonomy Id: 489910
Other names: CIP 109506, LMG 24060, LMG:24060, N. ampullae, Nosocomiicoccus ampullae Morais et al. 2008, strain TRF-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.