STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amsAmylosucrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (636 aa)    
Predicted Functional Partners:
glgB
4-alpha-glucanotransferase; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.971
glgX
Glycogen debranching enzyme GlgX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.871
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.776
ARC50114.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.723
pgmB
Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.643
ARC50006.1
Family 65 glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.631
ARC51987.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.630
pyk
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
    
 0.609
fabG
3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.609
ARC50859.1
Ribokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.589
Your Current Organism:
Neisseria sicca
NCBI taxonomy Id: 490
Other names: ATCC 29256, CCUG 23929, CCUG 24959, CIP 103345, DSM 17713, Diplococcos pharyngis siccus, Diplococcus siccus, LMG 5290, LMG:5290, N. sicca, NRL 30,016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.