STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI10370.1MI domain-containing protein. (932 aa)    
Predicted Functional Partners:
SSCI22270.1
Uncharacterized protein.
   
 0.986
SSCI62250.1
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.986
SSCI10380.1
Uncharacterized protein.
 
      0.891
SSCI04810.1
Probable YEF3-translation elongation factor eEF3.
   
 
 0.887
SSCI13810.1
Related to 80 kDa nuclear cap binding protein.
   
 0.885
SSCI41470.1
PABC domain-containing protein.
   
 0.879
SSCI29500.1
Uncharacterized protein.
   
 0.879
SSCI83240.1
RRM domain-containing protein.
   
 0.860
SSCI58810.1
Related to TIF2-translation initiation factor eIF4A.
   
 0.851
SSCI37480.1
Uncharacterized protein.
    
 0.849
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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