STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI04440.1Related to RNA14-component of pre-mRNA 3`-end processing factor CF I. (911 aa)    
Predicted Functional Partners:
SSCI36400.1
Related to Cleavage stimulation factor.
   
 0.998
SSCI86740.1
Fip1 domain-containing protein.
   
 0.996
SSCI27120.1
CID domain-containing protein.
    
 0.995
SSCI41540.1
Related to Symplekin.
    
 0.992
SSCI55330.1
Probable ENO1-enolase I (2-phosphoglycerate dehydratase).
  
 0.988
SSCI20640.1
CPSF_A domain-containing protein.
   
 0.983
SSCI03760.1
Related to PFS2-polyadenylation factor I subunit 2.
   
 0.982
SSCI11110.1
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.982
SSCI44530.1
Cytosine-specific methyltransferase.
    
 0.981
SSCI64860.1
Related to YSH1-component of pre-mRNA polyadenylation factor PF I.
   
 0.978
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.