STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI12940.1Related to OXA1-cytochrome oxidase biogenesis protein, mitochondrial. (543 aa)    
Predicted Functional Partners:
SSCI70560.1
Uncharacterized protein.
   
 0.952
SSCI39150.1
RF_PROK_I domain-containing protein.
  
 
 0.895
SSCI85740.1
Probable MRPL23-mitochondrial ribosomal protein, large subunit.
   
 
 0.893
SSCI12650.1
Related to IMG2-mitochondrial ribosomal protein of the large subunit.
   
 
 0.872
SSCI23940.1
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.837
SSCI27810.1
Related to MRPS9-mitochondrial ribosomal protein, small subunit.
   
   0.833
SSCI07890.1
Related to 50S ribosomal protein L4.
   
 
 0.823
SSCI54880.1
Uncharacterized protein.
   
 
 0.820
SSCI67660.1
Probable RML2-mitochondrial ribosomal protein, large subunit.
   
 
 0.820
SSCI18230.1
Related to MRP7-mitochondrial ribosomal protein, large subunit.
  
   0.810
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.