STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI16520.1FCP1 homology domain-containing protein. (601 aa)    
Predicted Functional Partners:
SSCI71920.1
Related to TFG1-TFIIF subunit (Transcription initiation factor), 105 kD.
    
 0.867
SSCI62160.1
LNS2 domain-containing protein.
    
 0.829
SSCI18240.1
Probable MAS6-mitochondrial inner membrane import translocase subunit.
    
 0.792
SSCI58070.1
Uncharacterized protein.
    
 0.779
SSCI51330.1
Probable TIM17-mitochondrial inner membrane import translocase subunit.
   
 0.773
SSCI60000.1
Uncharacterized protein.
    
 0.767
SSCI74840.1
Uncharacterized protein.
    
 0.762
SSCI01790.1
Related to RPB3-DNA-directed RNA polymerase II chain.
    
 0.746
SSCI14680.1
Probable Rpc40-40 kD subunit of DNA-directed RNA polymerases I and III.
    
 0.746
SSCI29390.1
Related to DNA-directed RNA polymerase 13.3K chain.
    
 0.743
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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