STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI20030.1Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
SSCI03740.1
Probable RFC2-DNA replication factor C, 41 KD subunit.
 
 
0.994
SSCI21270.1
Rep_fac_C domain-containing protein.
   
 0.992
SSCI61230.1
Probable RFC4-DNA replication factor C, 37 kDa subunit.
 
 
0.983
SSCI61680.1
Replication factor C subunit 1.
   
 0.981
SSCI15650.1
3'-5' exonuclease domain-containing protein.
   
 0.974
SSCI72490.1
Uncharacterized protein.
   
 0.974
SSCI41170.1
AAA domain-containing protein.
   
 0.971
SSCI74260.1
Vezatin domain-containing protein.
  
 0.969
SSCI52720.1
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.969
SSCI43480.1
Checkpoint protein; Belongs to the HUS1 family.
    
 0.962
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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