STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI29780.1Uncharacterized protein. (163 aa)    
Predicted Functional Partners:
SSCI02060.1
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.999
SSCI12680.1
Uncharacterized protein.
   
 0.999
SSCI16010.1
Ribosomal_L18e/L15P domain-containing protein.
   
 0.999
SSCI19640.1
Uncharacterized protein.
   
 0.999
SSCI20110.1
Probable ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
 0.999
SSCI08160.1
Uncharacterized protein.
   
 0.999
SSCI44630.1
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.999
SSCI11520.1
Probable RPL9A-ribosomal protein L9.e.
   
 0.999
SSCI08080.1
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
SSCI16070.1
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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