STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI24860.1Related to SKN7-transcription factor. (1003 aa)    
Predicted Functional Partners:
SSCI32330.1
Probable BMH1-14-3-3 protein epsilon; Belongs to the 14-3-3 family.
    
 0.985
SSCI20070.1
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.974
SSCI80270.1
Protein kinase domain-containing protein.
    
 0.970
SSCI45310.1
Related to KOG1-Subunit of TORC1, a rapamycin-sensitive complex involved in growth control.
   
 0.970
SSCI16470.1
HPt domain-containing protein.
    
 0.967
SSCI65090.1
Uncharacterized protein.
    
 0.965
SSCI59930.1
Related to SBA1-Hsp90 associated co-chaperone.
   
 0.964
SSCI02740.1
Related to HDA1-histone deacetylase A.
    
 0.963
SSCI16660.1
Hist_deacetyl domain-containing protein.
    
 0.963
SSCI00900.1
Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family.
     
 0.959
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.